PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.5G394700.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 523aa    MW: 56261.2 Da    PI: 6.3786
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.5G394700.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.35.8e-12212242333
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                          +k err+++NReAAr+sR+RKka++++Le+
  Sevir.5G394700.4.p 212 HDKTERRLAQNREAARKSRLRKKAYVQQLET 242
                         589**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-7210286IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-8212256No hitNo description
PROSITE profilePS502179.071212256IPR004827Basic-leucine zipper domain
PfamPF001706.6E-9213243IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-7214257No hitNo description
PROSITE patternPS000360217232IPR004827Basic-leucine zipper domain
PfamPF141443.7E-28295368IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    Send to blast
MVHGEESSWR MERAALPLNQ ALAYGVQAHA AAAAAPPSCF LDFQPAAAAA AYFGFGELEE  60
ALIHGGGGAS ANAGGGVDPG VIIKSDAPAQ TKPAAAGYLA GAGGGRPPTL EIFPSWPMRH  120
QQQLHSGNSQ SVGSTTDSSS AQNTMSQMEL VSPASPAPRQ EVMMVTTDDY SYKPGLAAAP  180
AAAPAPAPPS FQQHHPALPL HLHGGGGGGG DHDKTERRLA QNREAARKSR LRKKAYVQQL  240
ETSRIRLQQV EHELQRARSQ GLFVGGCSAA GDMSSGAAAF DMEYARWLDD DGKRLAELRG  300
GLQAHLDGNL GLIVEECVQH YDELFQLKAA LAHEDVFHLL TGGWATPAER CFFWMGGFRP  360
SELLKILIPQ LDPLTEQQLL GICNLQQSSE QAEEALAQGL HQLHQSLADT VAAGTLNDGA  420
AAPNYMSLMA VALEKLASLE SFYQQADNLR QQTLHQMRRI LTTRQAARCF LSIGEYYRRL  480
RALSNLWASR PRENFIGTES LSPTATELQV MHQQQQNQFS GF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0369490.0AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012701952.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X2
SwissprotP239231e-116HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotQ415581e-115HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLK3XGD50.0K3XGD5_SETIT; Uncharacterized protein
STRINGSi000955m0.0(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-130bZIP family protein